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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5158785_5223374_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5158785 - 5223374

Intron Length:

64590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CCTCTTGTAACG

Flanking Amino Acid:

GDPPETFCAMGNPYMCNNEC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

67.6

39.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

83.4

0.75

0.8

76.8

37.4

Minor 5ss

30.2

-2.3

3.2

35.2

42.4

Minor BPS

46.4

-0.4

2.1

51.22

43.9

Associated Gene:

Gene:

NTNG1

Ensembl Gene ID:

ENSAPLG00000005192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045952

5157872 - 5310986

153115

ENSAPLT00000039676

5157872 - 5310986

153115

ENSAPLT00000005360

5158075 - 5310986

152912