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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5251154_5260368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5251154 - 5260368

Intron Length:

9215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATTT

Flanking Amino Acid:

LPIPKGTANICIPSISSIGN

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.5

41.3

Major BPS

100

1.24

0.5

100

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

-1.2

2.8

55.8

41.5

Minor BPS

68.3

0.65

1.8

89.23

35.4

Associated Gene:

Gene:

NTNG1

Ensembl Gene ID:

ENSAPLG00000005192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039676

5157872 - 5310986

153115

ENSAPLT00000005360

5158075 - 5310986

152912