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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5260396_5310759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5260396 - 5310759

Intron Length:

50364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTATCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

CCCCTGTTATCT

Flanking Amino Acid:

ICIPSISSIGTNVCDNELLH

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

82.5

29.6

Major BPS

0.47

1.2

61.1

45.5

Major PPT

83.6

0.76

0.8

77.5

36.5

Minor 5ss

39.3

-1.2

2.9

Minor BPS

42.9

-0.4

2.2

55.81

46.8

Associated Gene:

Gene:

NTNG1

Ensembl Gene ID:

ENSAPLG00000005192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039676

5157872 - 5310986

153115