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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5340183_5342014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5340183 - 5342014

Intron Length:

1832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTTGG

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CTATTAAAAAAT

Flanking Amino Acid:

GWWRGEVNGRVGWFPSTYVE

Intron Amino Acid Position:

747

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

62.3

44.7

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

0.97

0.5

16.2

Minor 5ss

45.2

-0.5

2.5

49.2

47.1

Minor BPS

41.2

-0.5

2.1

59.82

43.1

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005530

5340141 - 5472564

132424

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416