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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5342167_5351829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5342167 - 5351829

Intron Length:

9663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TGTTTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTCTAATAATA

Flanking Amino Acid:

GQRSSRTGGNLLSPKVIGIA

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.5

0.82

0.9

84.6

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

48.9

-0

1.8

65.36

34.2

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424

ENSAPLT00000037557

5340141 - 5450005

109865