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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5355816_5356483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5355816 - 5356483

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCATTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATATTCATAAGT

Flanking Amino Acid:

KESGEYAISIKYNNEVKHIK

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

69.9

41.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

71.7

0.49

0.9

36.2

Minor 5ss

33.8

-1.8

3.2

40.5

39.9

Minor BPS

55.8

0.26

1.9

75.93

40.4

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424

ENSAPLT00000037557

5340141 - 5450005

109865