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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5356601_5357954_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5356601 - 5357954

Intron Length:

1354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

ACAATTTTACTT

Flanking Amino Acid:

PKPVDYSSQLWFAGAMERLQ

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

81.7

0.71

0.9

76.2

37.8

Minor 5ss

34.9

-1.7

3.1

47.1

42.6

Minor BPS

47.8

-0

1.5

58.71

39.3

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000005530

5340141 - 5472564

132424