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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5356601_5361967_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5356601 - 5361967

Intron Length:

5367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTCAATTTA

5'SS Class:

weak_major

3'SS Sequence:

TTCTGTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

ACAATTTTACTT

Flanking Amino Acid:

PCVSTVVHFILFAGAMERLQ

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.1

1.3

37.7

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

81.7

0.71

0.9

76.2

37.8

Minor 5ss

41.1

-1

55.4

43.2

Minor BPS

47.8

-0

1.5

58.71

39.3

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018665

5340141 - 5476556

136416