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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5357990_5361993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5357990 - 5361993

Intron Length:

4004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TCCTCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTCTCTTGTATT

Flanking Amino Acid:

PSDAVKPSPCVPKPVDYSSQ

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

73.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

77.9

0.63

0.8

76.4

32.3

Minor 5ss

-1.4

2.7

44.7

42.7

Minor BPS

55.8

0.26

1.8

76.15

40.9

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000005530

5340141 - 5472564

132424