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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5362060_5370186_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5362060 - 5370186

Intron Length:

8127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGTCTCAAAAAT

Flanking Amino Acid:

TGDAHSLFWQGRNLTTGELG

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

68.7

38.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

37.4

-1.4

3.5

55.6

48.6

Minor BPS

46.4

-0.1

68.39

41.8

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424