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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5370324_5391917_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5370324 - 5391917

Intron Length:

21594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGTC

5'SS Class:

major

3'SS Sequence:

GTTTTTGGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTTGTTTTATGT

Flanking Amino Acid:

IRRNSRHVDPGLPKMQVIRN

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

73.5

35.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

78.5

0.64

76.9

42.1

Minor 5ss

39.7

-1.2

3.1

52.8

44.4

Minor BPS

50.6

0.1

74.38

43.4

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424