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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5395067_5402611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5395067 - 5402611

Intron Length:

7545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

ACTTACCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACTTACCT

Flanking Amino Acid:

LDNCGRANSGEHGNLKHEKR

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

78.5

0.64

0.9

74.2

35.6

Minor 5ss

-1.6

47.1

42.6

Minor BPS

73.3

0.81

1.8

93.1

35.2

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000005530

5340141 - 5472564

132424