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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5405353_5422502_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5405353 - 5422502

Intron Length:

17150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

ATTTTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCAAATAATT

Flanking Amino Acid:

KKWLEQFQMALSNIRPDYAD

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.1

0.77

0.8

82.9

32.8

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

49.3

0.03

77.27

38.4

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424