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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5423513_5423991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5423513 - 5423991

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

CTCTACTGAATC

Flanking Amino Acid:

RQFQLSIENLNHSLLQYGRP

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.8

33.3

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

85.3

0.79

0.8

83.6

31.4

Minor 5ss

40.6

-1.1

3.2

54.1

45.6

Minor BPS

55.3

0.14

1.7

63.95

41.9

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424