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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5424079_5426207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5424079 - 5426207

Intron Length:

2129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

GTTGATGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTCCTGTTGATG

Flanking Amino Acid:

NLKLALDAMKDLAQYVNEVK

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.34

55.1

45.5

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

46.6

-0.4

2.1

54.78

41.3

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424