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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5426277_5427916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5426277 - 5427916

Intron Length:

1640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAC

U12 Branch Point Sequence:

AAAGCTGTAATT

Flanking Amino Acid:

RVLKYHLLLQELVKHTTDPM

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

0.42

1.1

38.5

Major PPT

70.6

0.46

65.7

39.9

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

47.9

-0

63.85

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424