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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5428013_5429391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5428013 - 5429391

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCAGTA

5'SS Class:

major

3'SS Sequence:

TGCTTTGAACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AAATCTTTAATC

Flanking Amino Acid:

AKEDVKLKLEECSKRANNGK

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.2

67.8

37.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

61.2

0.25

55.7

43.8

Minor 5ss

45.6

-0.5

3.2

64.6

46.8

Minor BPS

72.1

0.67

1.1

70.88

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005530

5340141 - 5472564

132424

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416