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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5435036_5435139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5435036 - 5435139

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAA

U12 Branch Point Sequence:

ATGTCTGTATGT

Flanking Amino Acid:

YTETLESIEKFFMVPLKRFL

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

74.9

29.1

Major BPS

67.8

0.44

1.1

69.6

37.5

Major PPT

90.4

0.91

0.6

85.3

Minor 5ss

39.9

-1.1

3.1

39.9

Minor BPS

44.2

-0.3

2.4

65.34

45.8

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424