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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5435233_5439286_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5435233 - 5439286

Intron Length:

4054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

ATTGTAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTCATTGTAATT

Flanking Amino Acid:

LMKDEAAQQPKYTENDIRSC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

73.8

37.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

75.1

0.56

67.7

Minor 5ss

0.61

2.2

85.2

31.6

Minor BPS

49.8

0.06

71.2

40.9

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037557

5340141 - 5450005

109865

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424