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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5443196_5472447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5443196 - 5472447

Intron Length:

29252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

CTAATCACAATT

Flanking Amino Acid:

DLFDVRDFGKVIETLSKLSR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

77.9

0.69

0.8

75.9

Major PPT

100

1.12

0.4

100

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

-0.2

1.8

62.49

41.6

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018665

5340141 - 5476556

136416

ENSAPLT00000005530

5340141 - 5472564

132424