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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5472565_5476475_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5472565 - 5476475

Intron Length:

3911

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTT|GCAAACTTG

5'SS Class:

weak_major

3'SS Sequence:

TTCTTTCCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTCACTTAATA

Flanking Amino Acid:

FFFLGGRFFFFLCLKNIRTF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.4

50.6

45.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.8

0.67

0.7

73.8

31.3

Minor 5ss

39.1

-1.2

4.2

60.8

45.3

Minor BPS

69.4

0.6

1.4

76.71

33.5

Associated Gene:

Gene:

VAV3

Ensembl Gene ID:

ENSAPLG00000005225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018665

5340141 - 5476556

136416