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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5558500_5558960_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
5558500 - 5558960

Intron Length:
461

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGGAAT

5'SS Class:
major

3'SS Sequence:
CAATTTCTTGTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTCAAT

U12 Branch Point Sequence:
GTTGCCTTACCT

Flanking Amino Acid:
SEKQAEKILQSIDADGTMSV

Intron Amino Acid Position:
133

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1.3
78.6
37.2

Major BPS
59.1
0.23
1.5
70.7
42.6

Major PPT
75.3
0.57
0.9
70
35.9

Minor 5ss
29.3
-2.4
3.1
39.7
45.9

Minor BPS
68.8
0.67
1.8
84.57
42.1

Associated Gene:

Gene:
SLC25A24

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

5550026 - 5570624
20599