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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5577851_5588910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5577851 - 5588910

Intron Length:

11060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TCCCTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAG

U12 Branch Point Sequence:

TCTTCCCTATTT

Flanking Amino Acid:

DGGSFSGESSREVVQANCVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

64.1

41.8

Major BPS

67.8

0.44

1.5

75.9

36.3

Major PPT

81.9

0.72

0.8

76.4

Minor 5ss

32.1

-2

3.4

43.3

44.5

Minor BPS

59.6

0.38

80.43

41.9

Associated Gene:

Gene:

FAM102B

Ensembl Gene ID:

ENSAPLG00000006400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006647

5577313 - 5598778

21466