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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5591071_5594454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5591071 - 5594454

Intron Length:

3384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTTCTCTTACA

Flanking Amino Acid:

QLMSGDPCFKMPPSTATSIA

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

86.1

24.6

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

46.2

-0.4

2.8

62.8

Minor BPS

61.9

0.37

1.9

80.2

35.2

Associated Gene:

Gene:

FAM102B

Ensembl Gene ID:

ENSAPLG00000006400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006647

5577313 - 5598778

21466