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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5607407_5608508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5607407 - 5608508

Intron Length:

1102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

AATGCTTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTGTTTTTAATG

Flanking Amino Acid:

DICASVMKEKMHRLYPLPAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

80.8

34.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.5

0.51

0.9

65.7

40.1

Minor 5ss

57.8

0.26

2.7

78.1

36.5

Minor BPS

65.3

0.34

1.3

62.99

39.9

Associated Gene:

Gene:

HENMT1

Ensembl Gene ID:

ENSAPLG00000025057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018727

5600831 - 5609596

8766