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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5625909_5626381_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5625909 - 5626381

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

AATTCTGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ATCACCTTAATT

Flanking Amino Acid:

VTCSGSSVGMVIYRGKNNAE

Intron Amino Acid Position:

810

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

74.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

76.4

0.59

69.1

Minor 5ss

33.3

-1.9

2.8

33.8

41.1

Minor BPS

75.9

0.89

1.2

83.14

38.1

Associated Gene:

Gene:

FNDC7

Ensembl Gene ID:

ENSAPLG00000006612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006868

5625845 - 5637177

11333