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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5633926_5636617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5633926 - 5636617

Intron Length:

2692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TCTCCTGTTATT

Flanking Amino Acid:

SLEMVFSSSTAPDIPVIDQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

0.47

1.2

61.1

45.5

Major PPT

79.7

0.67

0.9

77.9

35.9

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

46.6

-0.1

2.2

68.66

42.8

Associated Gene:

Gene:

FNDC7

Ensembl Gene ID:

ENSAPLG00000006612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025731

5633578 - 5638006

4429