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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5636637_5637114_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5636637 - 5637114

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTATTTCTAATT

Flanking Amino Acid:

LGLVCNSLEMVFSSSTGFSM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.9

31.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

90.2

0.9

0.6

88.3

21.4

Minor 5ss

27.7

-2.6

29.3

Minor BPS

57.5

0.31

1.6

73.73

37.3

Associated Gene:

Gene:

FNDC7

Ensembl Gene ID:

ENSAPLG00000006612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025731

5633578 - 5638006

4429

ENSAPLT00000006868

5625845 - 5637177

11333