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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5643290_5645510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5643290 - 5645510

Intron Length:

2221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTACTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

MTDLLAEGITVVENVYKNRE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

85.9

0.81

0.7

81.6

29.9

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

STXBP3

Ensembl Gene ID:

ENSAPLG00000006737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033738

5639836 - 5661646

21811

ENSAPLT00000007077

5638027 - 5661646

23620