Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_5657900_5658695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5657900 - 5658695

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTGG

5'SS Class:

major

3'SS Sequence:

AAATATTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ATCTTATGAAAT

Flanking Amino Acid:

PPTWNGSGAVSARQKTKASY

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

63.7

43.1

Major BPS

74.5

0.61

79.6

29.1

Major PPT

73.6

0.53

66.4

43.8

Minor 5ss

35.5

-1.6

3.3

46.8

48.5

Minor BPS

49.3

0.03

1.8

69.63

40.7

Associated Gene:

Gene:

STXBP3

Ensembl Gene ID:

ENSAPLG00000006737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033738

5639836 - 5661646

21811

ENSAPLT00000007077

5638027 - 5661646

23620