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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5670547_5672141_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5670547 - 5672141

Intron Length:

1595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCACTGGTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TACTATTGAATT

Flanking Amino Acid:

RIPELLQQLKALNQLKKYLD

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

79.8

35.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

55.1

0.11

1.2

55.1

39.2

Minor 5ss

35.1

-1.7

2.7

42.1

44.6

Minor BPS

0.24

1.6

70.86

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014322

5663943 - 5673185

9243