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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5689879_5690308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5689879 - 5690308

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTCCTTTTAATA

Flanking Amino Acid:

LDISRELNDKVGEARALYNL

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.5

0.73

0.9

81.2

36.5

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

0.37

1.2

64.57

36.3

Associated Gene:

Gene:

GPSM2

Ensembl Gene ID:

ENSAPLG00000013579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014192

5681897 - 5698920

17024