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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5690452_5690944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5690452 - 5690944

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TCCCCCAAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

TCCCCCAAAACA

Flanking Amino Acid:

TALQKAADYYEENLTIVTEL

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

69.9

41.1

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

60.4

0.23

55.1

32.7

Minor 5ss

37.4

-1.4

2.7

42.4

38.3

Minor BPS

48.6

-0.1

61.46

44.5

Associated Gene:

Gene:

GPSM2

Ensembl Gene ID:

ENSAPLG00000013579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014192

5681897 - 5698920

17024