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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5691464_5692106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5691464 - 5692106

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTTAGTTGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTGAGGTAACT

Flanking Amino Acid:

GEFETASEYYKRTLQLARQL

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

69.9

37.2

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

1.1

0.4

13.8

Minor 5ss

37.6

-1.4

2.7

42.4

38.4

Minor BPS

45.2

-0.2

2.7

76.43

Associated Gene:

Gene:

GPSM2

Ensembl Gene ID:

ENSAPLG00000013579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014192

5681897 - 5698920

17024