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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5693721_5694350_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5693721 - 5694350

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TCTTTCTTGAAG

Flanking Amino Acid:

ESHVVDNNLHGTRPRVGRRH

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

73.2

35.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.7

0.69

0.9

82.9

26.1

Minor 5ss

41.6

-0.9

3.1

55.7

43.9

Minor BPS

64.1

0.3

1.5

66.96

Associated Gene:

Gene:

GPSM2

Ensembl Gene ID:

ENSAPLG00000013579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014192

5681897 - 5698920

17024