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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5696736_5700045_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

5696736 - 5700045

Intron Length:

3310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

CTCATTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTTTTTAAAA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.7

0.56

0.9

72.6

37.5

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

70.1

0.63

1.3

75.76

35.6

Associated Gene:

Gene:

CLCC1

Ensembl Gene ID:

ENSAPLG00000013572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046512

5696538 - 5708958

12421

ENSAPLT00000014133

5696538 - 5708958

12421