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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5696754_5696872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5696754 - 5696872

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAT

U12 Branch Point Sequence:

CTGGGCTCATTT

Flanking Amino Acid:

SSTPPKTMRKSFSASVVSPH

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

0.3

1.3

65.3

43.7

Major PPT

77.6

0.62

0.7

69.4

31.3

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

40.9

-0.6

2.1

55.1

47.5

Associated Gene:

Gene:

GPSM2

Ensembl Gene ID:

ENSAPLG00000013579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014192

5681897 - 5698920

17024