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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5701147_5701736_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5701147 - 5701736

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTTGTATG

5'SS Class:

major

3'SS Sequence:

TTCCCACACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

TTTCCCACACCC

Flanking Amino Acid:

VLIIMALGVLAFCYGAGSSV

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

68.3

42.1

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

67.4

0.39

0.9

58.8

36.3

Minor 5ss

41.9

-0.9

2.5

49.4

40.9

Minor BPS

48.4

-0.1

2.1

69.68

41.4

Associated Gene:

Gene:

CLCC1

Ensembl Gene ID:

ENSAPLG00000013572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046512

5696538 - 5708958

12421

ENSAPLT00000014133

5696538 - 5708958

12421