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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5701884_5701962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5701884 - 5701962

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATGCC

5'SS Class:

major

3'SS Sequence:

TGTGTTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

ACAACATCATTT

Flanking Amino Acid:

NPVLLVPPTKALAITFTNFV

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

67.8

38.7

Major BPS

66.8

0.42

1.1

37.7

Major PPT

77.9

0.63

0.9

70.2

41.3

Minor 5ss

32.2

-2

3.4

44.7

43.3

Minor BPS

41.5

-0.5

1.9

53.72

41.4

Associated Gene:

Gene:

CLCC1

Ensembl Gene ID:

ENSAPLG00000013572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046512

5696538 - 5708958

12421

ENSAPLT00000014133

5696538 - 5708958

12421