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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5703244_5703693_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5703244 - 5703693

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

GATTCTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTTACAAAT

Flanking Amino Acid:

FGWNWFYLYKLAFAQHQAEI

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

80.7

33.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.4

0.62

0.9

70.4

35.9

Minor 5ss

37.6

-1.4

50.5

Minor BPS

51.3

0.12

1.9

78.14

37.9

Associated Gene:

Gene:

CLCC1

Ensembl Gene ID:

ENSAPLG00000013572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046512

5696538 - 5708958

12421

ENSAPLT00000014133

5696538 - 5708958

12421