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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5705177_5706105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5705177 - 5706105

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTAACTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTGCTTTTAACT

Flanking Amino Acid:

ILNEAGKLGLPEEDTDRVHY

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

89.7

0.98

0.7

89.9

Major PPT

72.3

0.5

70.4

39.1

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

74.6

0.85

1.2

84.67

Associated Gene:

Gene:

CLCC1

Ensembl Gene ID:

ENSAPLG00000013572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014133

5696538 - 5708958

12421

ENSAPLT00000046512

5696538 - 5708958

12421