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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5706214_5707042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5706214 - 5707042

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGGT

5'SS Class:

major

3'SS Sequence:

CTTTACATTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GCATCTTTACAT

Flanking Amino Acid:

FREVDSLQQKIAECEKRNAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.2

40.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

76.5

0.6

0.8

70.8

34.3

Minor 5ss

36.9

-1.5

3.1

50.4

45.9

Minor BPS

52.6

0.16

1.7

66.54

Associated Gene:

Gene:

CLCC1

Ensembl Gene ID:

ENSAPLG00000013572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046512

5696538 - 5708958

12421

ENSAPLT00000014133

5696538 - 5708958

12421