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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5707139_5708774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5707139 - 5708774

Intron Length:

1636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGGA

5'SS Class:

major

3'SS Sequence:

TTTGTAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCTTTTGTAATT

Flanking Amino Acid:

AAGAMRRPYKVNYYDSEDKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.3

40.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.9

0.63

0.9

75.5

38.4

Minor 5ss

22.1

-3.2

3.4

43.5

Minor BPS

58.8

0.35

78.3

39.3

Associated Gene:

Gene:

CLCC1

Ensembl Gene ID:

ENSAPLG00000013572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046512

5696538 - 5708958

12421

ENSAPLT00000014133

5696538 - 5708958

12421