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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5716865_5718320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5716865 - 5718320

Intron Length:

1456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTGCAAATAAAA

Flanking Amino Acid:

VCAYPEVIDPSAYNTPKQPV

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

0.3

62.3

30.4

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

43.2

-0.5

58.06

40.2

Associated Gene:

Gene:

WDR47

Ensembl Gene ID:

ENSAPLG00000013416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013988

5713959 - 5734534

20576

ENSAPLT00000043601

5713959 - 5734546

20588