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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5730609_5734429_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5730609 - 5734429

Intron Length:

3821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAAAAT

U12 Branch Point Sequence:

ATGGCTAAAATT

Flanking Amino Acid:

AAAGQAAGSDAAIMTAEETV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

77.9

30.9

Major BPS

58.2

0.21

1.2

65.3

36.8

Major PPT

86.6

0.82

0.6

85.4

Minor 5ss

43.9

-0.7

2.7

58.7

38.8

Minor BPS

45.3

-0.2

1.9

62.37

42.6

Associated Gene:

Gene:

WDR47

Ensembl Gene ID:

ENSAPLG00000013416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013988

5713959 - 5734534

20576

ENSAPLT00000043601

5713959 - 5734546

20588