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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5743432_5744495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5743432 - 5744495

Intron Length:

1064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

NEGQKKKILEEMEKSDANNF

Intron Amino Acid Position:

1388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.2

30.9

Major BPS

90.7

1.01

0.7

19.9

Major PPT

80.4

0.68

81.8

27.5

Minor 5ss

32.8

-2

3.7

46.2

49.1

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

CAMSAP2

Ensembl Gene ID:

ENSAPLG00000013256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033899

5742943 - 5819332

76390

ENSAPLT00000013823

5743126 - 5819332

76207