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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5744615_5745441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5744615 - 5745441

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGGC

5'SS Class:

major

3'SS Sequence:

TCCTCCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TATTGATTAACT

Flanking Amino Acid:

SSVASATEYTGPKLFKEPSA

Intron Amino Acid Position:

1348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

64.1

41.8

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

80.5

0.69

0.7

75.1

Minor 5ss

-2.5

3.2

35.5

41.1

Minor BPS

65.8

0.57

86.69

38.7

Associated Gene:

Gene:

CAMSAP2

Ensembl Gene ID:

ENSAPLG00000013256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013823

5743126 - 5819332

76207

ENSAPLT00000033899

5742943 - 5819332

76390