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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5745558_5746936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5745558 - 5746936

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCTA

5'SS Class:

strong_major

3'SS Sequence:

AATTAATGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTAAATAAAT

Flanking Amino Acid:

ESVQSGKRTPRSESVEGFLS

Intron Amino Acid Position:

1309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

39.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.7

0.4

1.1

63.4

46.2

Minor 5ss

33.7

-1.9

3.5

48.3

Minor BPS

50.7

0.1

2.1

81.25

39.2

Associated Gene:

Gene:

CAMSAP2

Ensembl Gene ID:

ENSAPLG00000013256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033899

5742943 - 5819332

76390

ENSAPLT00000013823

5743126 - 5819332

76207