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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5753040_5753546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5753040 - 5753546

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAATT

5'SS Class:

strong_major

3'SS Sequence:

TAATTTCACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTATTTTAATT

Flanking Amino Acid:

TPQQPYSSVPGVIRRSTSMS

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

86.5

28.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.3

0.41

0.9

67.3

38.9

Minor 5ss

39.5

-1.2

3.1

58.2

Minor BPS

69.9

0.7

1.2

79.53

37.3

Associated Gene:

Gene:

CAMSAP2

Ensembl Gene ID:

ENSAPLG00000013256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033899

5742943 - 5819332

76390

ENSAPLT00000013823

5743126 - 5819332

76207