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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5753618_5756181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5753618 - 5756181

Intron Length:

2564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

TCTTGCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTTGCTTTATA

Flanking Amino Acid:

DGPCGSDFVARLESPTYTPP

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

66.2

44.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.7

0.71

0.8

76.3

32.4

Minor 5ss

34.4

-1.8

3.4

47.3

48.1

Minor BPS

56.2

0.19

2.1

70.72

41.9

Associated Gene:

Gene:

CAMSAP2

Ensembl Gene ID:

ENSAPLG00000013256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033899

5742943 - 5819332

76390

ENSAPLT00000013823

5743126 - 5819332

76207